Landing page for the BER Data GitHub organizationhttps://doe-bridge.github.io/ https://github.com/doe-bridgeen Thu, 05 Nov 2026 18:10:21 -0000 Thu, 05 Nov 2026 18:10:21 -0000 1440 MkDocs RSS plugin - v1.19.0 None https://doe-bridge.github.io/ Sierra Moxon Data Modeling bervo linkml measurements samples schema <h1>How DOE-BRIDGE Models Data: LinkML and Ontologies</h1> <p>DOE-BRIDGE connects data from independently run BER resources: JGI, EMSL, ESS-DIVE, KBase, and NMDC. Each resource keeps its own database and its own formats. DOE-BRIDGE adds a shared data model on top, so a query can span all of them.</p> <p>This post explains how that data model is built: the schema language (LinkML), the ontology that names measured properties (BERVO), and two schema modules you can read and test today.</p> https://doe-bridge.github.io/blog/2026/11/05/how-doe-bridge-models-data-linkml-and-ontologies/ Thu, 05 Nov 2026 00:00:00 +0000 DOE-BRIDGEhttps://doe-bridge.github.io/blog/2026/11/05/how-doe-bridge-models-data-linkml-and-ontologies/ DOE-BRIDGE Announcements bridge site <h1>Introducing DOE-BRIDGE</h1> <p>DOE-BRIDGE is a collaborative effort across the U.S. Department of Energy's Biological and Environmental Research (BER) community to connect the data, schemas, and software produced by its major resources. This site is the entry point into that work.</p> https://doe-bridge.github.io/blog/2026/04/24/introducing-doe-bridge/ Fri, 24 Apr 2026 00:00:00 +0000 DOE-BRIDGEhttps://doe-bridge.github.io/blog/2026/04/24/introducing-doe-bridge/